Click on route name to get information for just a single route
For route Alameda Harbor Bay Ferry
| Stop | Direction | Number |
| Harbor Bay Alameda - Arrival | To Harbor Bay Alameda | -1 |
| San Francisco Ferry Building Gate E - Departure | To Harbor Bay Alameda | -1 |
| Harbor Bay Alameda - Departure | To San Francisco | -1 |
| San Francisco Ferry Building Gate E - Arrival | To San Francisco | -1 |
For route Larkspur Golden Gate Ferry
| Stop | Direction | Number |
| Golden Gate Ferry Terminal San Francisco - Depature | To Larkspur | -1 |
| Larkspur Ferry Terminal - Arrival | To Larkspur | -1 |
| Larkspur Ferry Terminal - Departure | To San Francisco | -1 |
| Golden Gate Ferry Terminal San Francisco - Arrival | To San Francisco | -1 |
For route Alameda/Oakland Ferry
| Stop | Direction | Number |
| Pier 41 San Francisco - Departure | To Oakland | -1 |
| Main Street Terminal Alameda - Departure Oakland | To Oakland | -1 |
| San Francisco Ferry Building Gate E - Departure Oakland | To Oakland | -1 |
| Clay Street Terminal Oakland - Arrival | To Oakland | -1 |
| Clay Street Terminal Oakland - Departure | To San Francisco | -1 |
| Main Street Terminal Alameda - Arrival | To San Francisco | -1 |
| Main Street Terminal Alameda - Departure San Francisco | To San Francisco | -1 |
| San Francisco Ferry Building Gate E - Arrival | To San Francisco | -1 |
| San Francisco Ferry Building Gate E - Departure Pier 41 | To San Francisco | -1 |
| Pier 41 San Francisco - Arrival | To San Francisco | -1 |
For route Sausalito Golden Gate Ferry
| Stop | Direction | Number |
| Golden Gate Ferry Terminal San Francisco - Depature | To Sausalito | -1 |
| Sausalito Ferry Landing - Arrival | To Sausalito | -1 |
| Sausalito Ferry Landing - Departure | To San Francisco | -1 |
| Golden Gate Ferry Terminal San Francisco - Arrival | To San Francisco | -1 |
For route Vallejo Baylink Ferry
| Stop | Direction | Number |
| Vallejo Terminal - Departure | To San Francisco | -1 |
| San Francisco Ferry Building Gate B - Arrival | To San Francisco | -1 |
| Vallejo Terminal - Arrival | To Vallejo | -1 |
| San Francisco Ferry Building Gate B - Departure | To Vallejo | -1 |
| Pier 41 San Francisco - Arrival | To Vallejo | -1 |
| Pier 41 San Francisco - Departure | To Vallejo | -1 |